Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920528.1_cds_XP_016469625.1_62157
CDS Infomation

[gene=LOC107791975] [db_xref=GeneID:107791975] [protein=pectinesterase-like] [protein_id=XP_016469625.1] [location=complement(join(1301..1989,2451..3405))] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTCACAACCATTGTTGGACACACCGAAAAGAAAATCCTCCACTTCTAAA
GCTCTCTATGTTCTTCTCTCCATAGCTGCTATTGTGGGCTCAGTTGGATTAGTTTCAATC
TGGGCTATTAATGTCAGCAGCCCATCTCTTTCCTTGACAGCCCATGTTTGTGATCAGGCC
CATGATCAGCCATCTTGCTTGGCCATGGTGTCTGAGGTTGCACCTGTTGGTTTGATGGAT
TCCACGACAGTGGATTTGTTACAGATGGTTTTGCATAAATCATCGTTAAAAATCCACGAG
ACGATCGATTTAGTGAGCAATGTGAACGTTAGGATCAATGATGGGAAGGAGCAAGCAGCT
CTAGCAGATTGTCTAGAGTTAATGGATTTGTCAAGTGACAGATTAATGGACTCCATGATG
TTACTTGGGAACTTGTCGGCCCAAACCCACTTTGATGTCCATACATGGCTAAGTAGCATT
CTGACTAACCATGCTACTTGCATGGATGGGCTAAGTGGTCAGGCCCGGACCATTATGAAG
CCCATATTGAAGGATTTGATAGTAAGAGCAAAGACTTCTTTAGCCTTGATGGTTAAAATG
GCACCATCTAATACCATGGATCTTCCATCAGTTACTGATGGATTACCCTCATGGGTTACT
TCTTATGATAGAAGGCTTTTGCAACTTTCTGCAAATGCCATAACAGCCAATGTTGTAGTG
GCTAAAGATGGTAGCGGAAAATTCAAGACAATAAAGGAAGCAGTAGCATCAGCTCCAGAT
AATAGCAAGACTCGTTATGTTATATATGTGAAAAAAGGAATATACAAAGAGAATGTTGAG
ATTGGGAAAAAGAAGAAAAATGTGATGCTTGTTGGTGATGGCATGGACGCCACCATCATC
ACTGGTAGCTTGAATGTTGTCGATGGTGCAACAACCTTCAACTCTGCAACTGTTGCTGCT
GTTGGGGATGGATTCATAGCCCAGGATCTGCAGTTTCAAAACACAGCAGGAGCAGCAAAA
CACCAAGCAGTGGCACTTCGTGTTGGGGCAGATCAATCAGTCATCAATCGTTGCAAAATA
GATGCATTCCAGGATACCCTCTATACCCACAGCCTCCGCCAATTCTACAGAGATTGTTAC
ATCACTGGCACTGTAGATTTCATCTTTGGTAATGCAGCAGTCGTGTTCCAAAACTCAAAA
ATCGCAGCACGAAAGCCTGGGCCTGGACAAAAGAACATGGTTACAGCTCAAGGTCGTGAA
GATCCAAACCAAAATACAGGAACTTCAATCCAAAATTGTGACATTATTGCTACCTCAGAC
CTTGCACCATTGAAAGGGTCCGTTAAGACATATTTGGGCCGTCCGTGGAAAGCGTACTCA
CGAACTGTATTTATGCAGTCCAATATTGGAGACCATATTGACCCAGAAGGTTGGTCAGTA
TGGGATGGTGATTTTGCCTTGAAAACTTTATATTATGGTGAGTATATGAACAAAGGACCT
GGAGCTGGAATTAGTAAGAGAGTGAAGTGGCCTGGTTATCATATTTTAAGTGCTTCAGAG
GCAACGAAATTCACAGTGGGTCAGCTGATTCAAGGAGGAGTATGGTTGAAATCTACTGGT
GTGGCTTACACTGAGGGCTTGTGA

Peptide Sequence

PEP ID

XP_016469625.1
PEP Infomation

PREDICTED: pectinesterase-like [Nicotiana tabacum]
Sequence

MASSSQPLLDTPKRKSSTSKALYVLLSIAAIVGSVGLVSIWAINVSSPSLSLTAHVCDQA
HDQPSCLAMVSEVAPVGLMDSTTVDLLQMVLHKSSLKIHETIDLVSNVNVRINDGKEQAA
LADCLELMDLSSDRLMDSMMLLGNLSAQTHFDVHTWLSSILTNHATCMDGLSGQARTIMK
PILKDLIVRAKTSLALMVKMAPSNTMDLPSVTDGLPSWVTSYDRRLLQLSANAITANVVV
AKDGSGKFKTIKEAVASAPDNSKTRYVIYVKKGIYKENVEIGKKKKNVMLVGDGMDATII
TGSLNVVDGATTFNSATVAAVGDGFIAQDLQFQNTAGAAKHQAVALRVGADQSVINRCKI
DAFQDTLYTHSLRQFYRDCYITGTVDFIFGNAAVVFQNSKIAARKPGPGQKNMVTAQGRE
DPNQNTGTSIQNCDIIATSDLAPLKGSVKTYLGRPWKAYSRTVFMQSNIGDHIDPEGWSV
WDGDFALKTLYYGEYMNKGPGAGISKRVKWPGYHILSASEATKFTVGQLIQGGVWLKSTG
VAYTEGL

Transcript Sequence

Gene sequence data has not been registered.